2020 Joint AAPM | COMP Virtual Meeting
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Session Title: Advances of Radiomics and Genomics in Cancer Management
Question 1: 1. What are different ways to implement AI in clinical practice
Reference:Giger ML, Karssemeijer N, Schnabel J: Breast image analysis for risk assessment, detection, diagnosis, and treatment of cancer. Annual Review of Biomedical Engineering15:327-357, 2013.
Choice A:Second reader
Choice B:Primary reader for triaging
Choice C:Autonomous reader
Choice D:All of the above
Question 2: 2. Conceptually, what is the difference between using human-engineered radiomic features and deep learning in characterizing tumors for assessing treatment response?
Reference:Giger ML: Machine Learning in Medical Imaging. J Am Coll Radiol. 2018 Mar;15 (3 Pt B):512-520. doi: 10.1016/j.jacr.2017.12.028. Epub Feb 2, 2018.
Choice A:Intuitive understanding
Choice B:Benefit to the prognosis
Choice C:Calculation time once system is trained
Choice D:Need for medical truth for the evaluation
Question 3: What may be characteristics of therapeutic biomarkers?
Reference:Sahiner B, Pezeshk A, Hadjiiski LM, Wang X, Drukker K, Cha KH, Summers RM, Giger ML: Deep learning in medical imaging and radiation therapy. Medical Physics, 2018
Choice A:Single feature characteristic
Choice B:Merged characteristic via a tumor signature
Choice C:Change in biomarker over treatment
Choice D:Correlation with cancer subtypes
Choice E:All of the above
Question 4: The biological evolution of species acts through differences in survival based most directly on:
Reference:Wagner GP, Altenberg L. Perspective: complex adaptations and the evolution of evaluability. Evolution. 1996 Jun;50(3):967-76. https://doi.org/10.1111/j.1558-5646.1996.tb02339.x
Choice A:The genotype
Choice B:The phenotype
Choice C:The metabolome
Question 5: Single gene effect sizes with respect to complex phenotype endpoints have a distribution that is:
Reference:Chesmore, K., Bartlett, J. & Williams, S.M. The ubiquity of pleiotropy in human disease. Hum Genet 137, 39–44 (2018). https://doi.org/10.1007/s00439-017-1854-z
Choice A:Gaussian
Choice B:Linear
Choice C:Exponentially decaying
Question 6: The pre-conditioned random forest regression (PRFR) machine learning method has been used to show that:
Reference:Oh JH, Kerns S, Ostrer H, Powell SN, Rosenstein B, Deasy JO. Computational methods using genome-wide association studies to predict radiotherapy complications and to identify correlative molecular processes. Scientific reports. 2017 Feb 24;7:43381. https://doi.org/10.1038/srep43381
Choice A:Large variations in risk between people based on genetic factors are common
Choice B:Many genes typically contribute to the probability of a complex phenotype endpoint
Choice C:Closely related genes (sub-networks/modules) often appear among the predictors
Choice D:All of the above
Question 7: Which of the following are useful in the management of patients with colorectal cancer?
Reference:Irene Yu and Winson Cheung: Metastatic Colorectal cancer in the Era of Personalized Medicine: A more tailored approach to systemic therapy. Canadian Journal of Gastroenterology and Hepatology. Volume 2018, Article ID 9450754, 11 pages https://doi.org/10.1155/2018/9450754
Choice A:Kras mutation
Choice B:MSI status
Choice C:B-RAF mutation
Choice D:all of the above
Question 8: Radiomics is a brunch of imaging sciences which generally includes the following sequential process:
Reference:Chintan Parmar, Patrick Grossmann, Johan Bussink, Philippe Lambin, Hugo J. W. L. Aerts. “Machine learning methods for Quantitative Radiomic Biomarkers.” Scientific Reports | 5:13087 | DOI: 10.1038/srep13087 5
Choice A:Image acquisition, image segmentation, feature extraction, feature analysis
Choice B:CT and MRI, image segmentation, deep learning, prediction model
Choice C:Artificial intelligence, auto-segmentation, feature analysis, prediction model
Choice D:Texture analysis, image segmentation, machine learning, precision medicine
Choice E:Feature calculation, auto-segmentation, feature analysis, precision medicine
Question 9: The following factors affect the calculated values of radiomics features
Reference:Chang, Yushi; Lafata, Kyle; Wang, Chunhao; Duan, Xiaoyu; Geng, Ruiqi; Yang, Zhenyu; Yin, Fang-Fang. “Digital Phantoms for Characterizing Inconsistencies among Radiomics Extraction Toolboxes." Biomedical Physics & Engineering Express Biomed. Phys. Eng. Express 6 (2020) 025016
Choice A:Texture pattern in the image
Choice B:Image quality
Choice C:Algorithm used for parameter calculation
Choice D:Algorithm used for radiomics feature calculation
Choice E:All above
Question 10: Treatment outcome prediction using radiomics features extracted from the free-breathing thoracic CT images may differ from that extracted from the breath hold thoracic CT images
Reference:K. Lafata, R. Geng, B. Ackerson, J. Hong, C. Kelsey, Z. Zhou, J.G. Liu, F.F. Yin. “Association of Pre-treatment Radiomic Features with Lung Cancer Recurrence Following Stereotactic Body Radiation Therapy.” Phys Med Biol. 2019 Jan 8;64(2):025007. doi: 10.1088/1361-6560/aaf5a5.
Choice A:True
Choice B:False
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